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71193.
Multiple Sequence Alignment
 
Summary
alignement multiple de séquences
Translated by Michael Vogt
Located in Package: t-coffee
71194.
T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Version 2.00 and higher can mix sequences and structures.
 
Description
T-Coffee est un programme d'alignement multiple de séquences. À partir d'un ensemble de séquences (protéines ou ADN), T-Coffee crée un alignement multiple. Les versions[nbsp]2.00 et supérieures peuvent mélanger les séquences et les structures.
Translated by Michael Vogt
Located in Package: t-coffee
71195.
T-Coffee allows the combination of a collection of multiple/pairwise, global or local alignments into a single model. It also allows to estimate the level of consistency of each position within the new alignment with the rest of the alignments. See the pre-print for more information
 
Description
T-Coffee permet la combinaison de collections d'alignements multiples de séquences, globaux ou locaux, dans un modèle unique. Il permet aussi d'estimer le niveau de cohérence entre le nouvel alignement et les autres. Veuillez vous référer à l'épreuve incluse pour plus d'informations.
Translated by Michael Vogt
Located in Package: t-coffee
71196.
T-Coffee has a special called M-Coffee that makes it possible to combine the output of many multiple sequence alignment packages. In its published version, it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal[nbsp]W, PCMA and T-Coffee. A special version has been made for Debian, DM-Coffee, that uses only free software by replacing Clustal[nbsp]W by Kalign. Using the 8 Methods of M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite methods if you prefer.
 
Description
T-Coffee dispose d'une variante appelée M-Coffee qui permet la combinaison de sorties de nombreux paquets d'alignement de séquences. Dans sa version publiée, il utilise MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal[nbsp]W, PCMA et T-Coffee. Une version spéciale, DM-Coffee, a été faite pour Debian. Cette version n'utilise que des logiciels libres grâce au remplacement de Clustal[nbsp]W par Kalign. L'utilisation des huit méthodes proposées par M-Coffee peut parfois s'avérer lourde. Il est néanmoins possible de n'en utiliser qu'un sous-ensemble de son choix.
Translated by Michael Vogt
Located in Package: t-coffee
71197.
PDF and HTML accompaning documents to T-Coffee
 
Summary
(no translation yet)
Located in Package: t-coffee-doc
71198.
The tool for multiple sequence alignment, T-Coffee, is explained both from the users' perspective and for its technical background.
 
Description
(no translation yet)
Located in Package: t-coffee-doc
71199.
annotated examples for the use of T-Coffee
 
Summary
exemples annotés pour l'utilisation de T-Coffee
Translated by Michael Vogt
Located in Package: t-coffee-examples
71200.
To help increasing the proficiency in the use of T-Coffee, this package provides examples for input sequences and their proper alignment.
 
Description
Pour aider à accroître les compétences dans l'utilisation de T-Coffee, ce paquet fournit des exemples de séquences d'entrée et leur alignement correct.
Translated by Michael Vogt
Located in Package: t-coffee-examples
71201.
display filter for Internet messages
 
Summary
filtre d’affichage pour les messages par Internet
Translated by Michael Vogt
Located in Package: t-prot
71202.
This program provides "TOFU-Protection" to improve the readability of email and newsposts. TOFU is a German acronym for "Text oben, Fullquote unten", meaning the regrettably widespread reply style that leaves all the quotes untrimmed and just adds some text at the top. This script filters annoying mailing list footers, long signatures, and TOFU, as well as squeezing sequences of blank lines, exclamation marks, etc.
 
Description
Ce programme fournit «[nbsp]TOFU-Protection[nbsp]» pour améliorer la lecture des courriels ou de nouvelles. TOFU est un acronyme allemand pour «[nbsp]Text oben, Fullquote unten[nbsp]» (texte au-dessus, toutes les citations en dessous), se référant à l’ancien et regrettable style de réponse laissant toutes les citations entières et ajoutant quelque texte au-dessus. Ce script filtre tous les ennuyeux pieds de page, signatures longues et TOFU, ainsi que le raccourcissement de suites de lignes blanches, points d’exclamation,[nbsp]etc.
Translated by Michael Vogt
Located in Package: t-prot
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