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Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.
 
Description
Samtools est un ensemble d'utilitaires qui manipulent les alignements de séquence de nucléotides dans le format binaire BAM. Il est capable d'importer et d'exporter à partir du format SAM («[nbsp]Sequence Alignment/Map[nbsp]»), de trier, de fusionner, d'indexer et de récupérer des enregistrements dans n'importe quelle région facilement. Il est conçu pour travailler sur un flux de données et est capable d'ouvrir un fichier BAM (mais pas SAM) sur un serveur HTTP ou FTP distant.
Translated by Michael Vogt
Located in Package: samtools
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