Package Descriptions for Ubuntu

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  2. Template “ddtp-ubuntu-universe”
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9933 → 9942 of 54563 results First • • • Last
9933.
pair-wise alignment-plots for genomic sequences in PostScript
 
Summary
Paarweise Alignmentplots für genomische Sequenzen in PostScript
Translated by Michael Vogt
Located in Package: gff2aplot
9934.
A program to visualize the alignment of two genomic sequences together with their annotations. From GFF-format input files it produces PostScript figures for that alignment. The following menu lists many features of gff2aplot:
* Comprehensive alignment plots for any GFF-feature. Attributes are defined
separately so you can modify only whatsoever attributes for a given file or
share same customization across different data-sets.
* All parameters are set by default within the program, but it can be also
fully configured via gff2ps-like flexible customization files. Program can
handle several of such files, summarizing all the settings before producing
the corresponding figure. Moreover, all customization parameters can be set
via command-line switches, which allows users to play with those parameters
before adding any to a customization file.
* Source order is taken from input files, if you swap file order you can
visualize alignment and its annotation with the new input arrangement.
* All alignment scores can be visualized in a PiP box below gff2aplot area,
using grey-color scale, user-defined color scale or score-dependent
gradients.
* Scalable fonts, which can also be chosen among the basic PostScript default
fonts. Feature and group labels can be rotated to improve readability in
both annotation axes.
* The program is still defined as a Unix filter so it can handle data from
files, redirections and pipes, writing output to standard-output and
warnings to standard error.
* gff2aplot is able to manage many physical page formats (from A0 to A10, and
more -see available page sizes in its manual-), including user-defined ones.
This allows, for instance, the generation of poster size genomic maps, or
the use of a continuous-paper supporting plotting device, either in portrait
or landscape.
* You can draw different alignments on same alignment plot and distinguish
them by using different colors for each.
* Shape dictionary has been expanded, so that further feature shapes are now
available (see manual).
* Annotation projections through alignment plots (so called ribbons) emulate
transparencies via complementary color fill patterns. This feature allows
to show color pseudo-blending when horizontal and vertical ribbons overlap.
 
Description
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Located in Package: gff2aplot
9935.
produces PostScript graphical output from GFF-files
 
Summary
Erstellt PostScript-Grafiken aus GFF-Dateien
Translated by Michael Vogt
Located in Package: gff2ps
9936.
gff2ps is a script program developed with the aim of converting gff-formatted records into high quality one-dimensional plots in PostScript. Such plots maybe useful for comparing genomic structures and to visualizing outputs from genome annotation programs. It can be used in a very simple way, because it assumes that the GFF file itself carries enough formatting information, but it also allows through a number of options and/or a configuration file, for a great degree of customization.
 
Description
gff2ps ist ein Skript zur Umwandlung von GFF-formatierten Datensätzen in qualitativ hochwertige eindimensionale PostScript-Plots. Diese Plots können verwendet werden, um Genomstrukturen zu vergleichen und die Ausgaben von Programmen zur Annotation von Genomen zu visualisieren. gff2ps kann sehr einfach verwendet werden, weil es davon ausgeht, dass die GFF-Datei bereits genügend Formatierungsinformationen enthält. Die Ausgabe kann aber ebenso über zusätzliche Optionen und/oder eine Konfigurationsdatei den Wünschen entsprechend angepasst werden.
Translated by Michael Vogt
Located in Package: gff2ps
9937.
xfire plugin for pidgin
 
Summary
(no translation yet)
Located in Package: gfire
9938.
Gfire is an open source plugin for the Pidgin IM client which allows you to connect to the Xfire network. It features full friend list support, including game and server statuses, group chat, and profiles.
 
Description
(no translation yet)
Located in Package: gfire
9939.
Xfire is a network that allows gamers to talk to each other while playing a game. It keeps track of games you open and synchronizes your status online, and allows you to join friends' games with a few clicks of the mouse.
 
Description
(no translation yet)
Located in Package: gfire
9940.
Texas Instruments hand-helds file manipulation program for X
 
Summary
(no translation yet)
Located in Package: gfm
9941.
The GFM is an application allowing to manipulate single/group/tigroup files of all Texas Instruments hand-helds. It can create a new file, open an existing file, save file, rename variables, remove variables, create folders, group files into a group/tigroup file, ungroup a group/tigroup file into single files.
 
Description
(no translation yet)
Located in Package: gfm
9942.
collaborative development tool - metapackage
 
Summary
(no translation yet)
Located in Package: gforge
9933 → 9942 of 54563 results First • • • Last

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Contributors to this translation: Alexander Hartl, Björn Ternes, Carlos Perelló Marín, Carsten Gerlach, Christian Flasche, Christoph Gerlach, Daniel, Daniel Schury, Daniel Winzen, David Ayers, Denise Tiersch, Dennis Baudys, Dr. Peter Netz, Eduard Gotwig, Florian Greinus, Frank Sagner, Ghenrik, Hendrik Schrieber, Jakob Kramer, Jan Simon, Johannes Storm, Jonas Endersch, Jonathan Kolberg, Joshua Feis, Jürgen Schwarze, Laurent Kap, Lucas Meyer, Lukas Bögelein, MJJoker, Manfred Wiktorin, Marc Rodrigues, Marijo Mustac, Mark Mahler, Marsu, Martin Weil, Max Wiedenmann, Michael Steuernagel, Michael Vogt, Moritz Baumann, Nico Bauer, Niko K, Oliver Duerre, Pascal De Vuyst, Phil Krämer, Rajek, Robin, Ronald Müller, Sascha, Severin H, Simeon, Startlett, Stefan Gebhardt, Stephan Woidowski, Steve Langasek, Sven Seelbach, Thomas Schwiertz, Tobias Bannert, Torsten Franz, ctx, dstaubsauger, greenscandic, hpeck, kilaviljenn, scrawl, shilbert, stepstra, Łukasz Zemczak.