|
10.
|
|
|
de novo, parallel, sequence assembler for short reads
|
|
|
Summary
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: abyss
|
|
11.
|
|
|
ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: abyss
|
|
12.
|
|
|
To cite your use of ABySS, please reference ABySS: A parallel assembler for short read sequence data. Simpson JT, Wong K, Jackman SD, Schein JE, Jones SJ, Birol I. Genome Research, 2009-June.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: abyss
|
|
16.
|
|
|
archive file manipulation program
|
|
|
Summary
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: afio
|
|
17.
|
|
|
Afio manipulates groups of files, copying them within or between filesystems and an afio archive.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: afio
|
|
18.
|
|
|
Afio archives are portable as they contain only ASCII-formatted header information. Afio makes cpio-format archives. Afio deals somewhat gracefully with input data corruption. Afio supports multi-volume archives during interactive operation. Afio can make compressed archives that are much safer than compressed tar or cpio archives.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: afio
|
|
19.
|
|
|
Afio is best used as an `archive engine' in a backup script.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: afio
|
|
42.
|
|
|
Processor microcode firmware for AMD CPUs
|
|
|
Summary
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: amd64-microcode
|
|
43.
|
|
|
This package contains microcode patches for all AMD AMD64 processors. AMD releases microcode patches to correct processor behavior as documented in the respective processor revision guides.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: amd64-microcode
|
|
44.
|
|
|
For Intel processors, please refer to the intel-microcode package.
|
|
|
Description
|
|
|
|
(no translation yet)
|
|
|
|
Located in
Package: amd64-microcode
|